This is the Windows app named ANDTool whose latest release can be downloaded as AND_v_1_0_WIN64bit_Standalone.zip. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS
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ANDTool
DESCRIPTION
Analysis Nuclei DAB (AND) Tool is a Graphical User Interface (GUI) to analyse microscopy images representing cells with nuclei stained using DAB dyes.
The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function:
"ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB"
Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing the sample in three regions according to the FastRed channel: a dark-red ROI, a light-pink ROI and a white ROI.
ANDTool is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code and standalone versions are here available for download.
USER MANUAL: see the specific PDF available in the Files section.
REQUIREMENTS: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions.
MAIN CONTACT: Filippo Piccinini (E-mail: [email protected])
Features
- MATLAB
- Standalone version
- Source code
- Sample images
- Microscopy
Audience
Advanced End Users
Programming Language
MATLAB
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/andtool/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
