This is the command pepwindowalle that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
pepwindowall - Draw Kyte-Doolittle hydropathy plot for a protein alignment
SYNOPSIS
pepwindowall -sequences seqset [-datafile datafile] [-length integer] [-normalize boolean]
-graph xygraph
pepwindowall -help
DESCRIPTION
pepwindowall is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Protein:Properties" command group(s).
OPTIONS
Input section
-sequences seqset
File containing a sequence alignment
-datafile datafile
Default value: Enakai.dat
Additional section
-length integer
Default value: 19
-normalize boolean
Default value: N
Output section
-graph xygraph
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