This is the command fastaq-to_fasta that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
fastaq_to_fasta - Converts a variety of input formats to nicely formatted FASTA format
DESCRIPTION
usage: fastaq_to_fasta [options] <infile> <outfile>
Converts a variety of input formats to nicely formatted FASTA format
positional arguments:
infile Name of input file. Can be any of FASTA, FASTQ, GFF3, EMBL, GBK, Phylip
outfile
Name of output file
optional arguments:
-h, --help
show this help message and exit
-l LINE_LENGTH, --line_length LINE_LENGTH
Number of bases on each sequence line of output file. Set to zero for no
linebreaks in sequences [60]
-s, --strip_after_whitespace
Remove everything after first whitespace in every sequence name
-u, --check_unique
Die if any of the output sequence names are not unique
Use fastaq-to_fasta online using onworks.net services
