ืื ื’ืœื™ืชืฆืจืคืชื™ืชืกืคืจื“ื™

ืกืžืœ OnWorks

CUDASW++: ืืœื’ื•ืจื™ืชื Smith-Waterman ืœื”ืคืขืœื” ื‘ืœื™ื ื•ืงืก ื‘ืื™ื ื˜ืจื ื˜

ื”ื•ืจื“ื” ื—ื™ื ื CUDASW++: ืืœื’ื•ืจื™ืชื Smith-Waterman ืœื”ืคืขืœื” ื‘ืืคืœื™ืงืฆื™ื™ืช ืœื™ื ื•ืงืก ืžืงื•ื•ื ืช ืœื™ื ื•ืงืก ืœื”ืคืขืœื” ืžืงื•ื•ื ืช ื‘ืื•ื‘ื•ื ื˜ื• ืžืงื•ื•ื ืช, ืคื“ื•ืจื” ืžืงื•ื•ื ืช ืื• ื“ื‘ื™ืืŸ ืžืงื•ื•ื ืช

ื–ื•ื”ื™ ืืคืœื™ืงืฆื™ื™ืช ื”ืœื™ื ื•ืงืก ื‘ืฉื CUDASW++: Smith-Waterman Algorithm ืœืจื•ืฅ ื‘ืœื™ื ื•ืงืก ืžืงื•ื•ืŸ ืฉื ื™ืชืŸ ืœื”ื•ืจื™ื“ ืืช ื”ืžื”ื“ื•ืจื” ื”ืื—ืจื•ื ื” ืฉืœื• ื›-cudasw++v2.0.11.tar.gz. ื ื™ืชืŸ ืœื”ืคืขื™ืœ ืื•ืชื• ื‘ืื•ืคืŸ ืžืงื•ื•ืŸ ื‘ืกืคืง ื”ืื™ืจื•ื— ื”ื—ื™ื ืžื™ OnWorks ืขื‘ื•ืจ ืชื—ื ื•ืช ืขื‘ื•ื“ื”.

ื”ื•ืจื“ ื•ื”ืคืขืœ ื‘ืื•ืคืŸ ืžืงื•ื•ืŸ ืืช ื”ืืคืœื™ืงืฆื™ื” ื”ื–ื• ื‘ืฉื CUDASW++: Smith-Waterman Algorithm ืœื”ืคืขืœื” ื‘ืœื™ื ื•ืงืก ื‘ืื•ืคืŸ ืžืงื•ื•ืŸ ืขื OnWorks ื‘ื—ื™ื ื.

ื‘ืฆืข ืืช ื”ื”ื•ืจืื•ืช ื”ื‘ืื•ืช ื›ื“ื™ ืœื”ืคืขื™ืœ ืืช ื”ืืคืœื™ืงืฆื™ื” ื”ื–ื•:

- 1. ื”ื•ืจื“ ืืช ื”ื™ื™ืฉื•ื ื”ื–ื” ืœืžื—ืฉื‘ ืฉืœืš.

- 2. ื”ื–ืŸ ื‘ืžื ื”ืœ ื”ืงื‘ืฆื™ื ืฉืœื ื• https://www.onworks.net/myfiles.php?username=XXXXX ืขื ืฉื ื”ืžืฉืชืžืฉ ืฉืืชื” ืจื•ืฆื”.

- 3. ื”ืขืœื” ืืช ื”ื™ื™ืฉื•ื ื”ื–ื” ื‘ืžื ื”ืœ ืงื‘ืฆื™ื ื›ื–ื”.

- 4. ื”ืคืขืœ ืืช ื”ืืžื•ืœื˜ื•ืจ ื”ืžืงื•ื•ืŸ ืฉืœ OnWorks Linux ืื• Windows ืžืงื•ื•ืŸ ืื• ืืžื•ืœื˜ื•ืจ ืžืงื•ื•ืŸ ืฉืœ MACOS ืžืืชืจ ื–ื”.

- 5. ืžืžืขืจื›ืช ื”ื”ืคืขืœื” OnWorks Linux ืฉื–ื” ืขืชื” ื”ืชื—ืœืช, ืขื‘ื•ืจ ืืœ ืžื ื”ืœ ื”ืงื‘ืฆื™ื ืฉืœื ื• https://www.onworks.net/myfiles.php?username=XXXXX ืขื ืฉื ื”ืžืฉืชืžืฉ ื”ืจืฆื•ื™.

- 6. ื”ื•ืจื“ ืืช ื”ืืคืœื™ืงืฆื™ื”, ื”ืชืงืŸ ืื•ืชื” ื•ื”ืคืขืœ ืื•ืชื”.

CUDASW++: ืืœื’ื•ืจื™ืชื Smith-Waterman ืœื”ืคืขืœื” ื‘ืœื™ื ื•ืงืก ื‘ืื™ื ื˜ืจื ื˜


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ืชื™ืื•ืจ

ืชื•ื›ื ืช CUDASW++ ื”ื™ื ืชื•ื›ื ืช ืงื•ื“ ืคืชื•ื— ืฆื™ื‘ื•ืจื™ืช ืœื—ื™ืคื•ืฉื™ ืžืกื“ ื ืชื•ื ื™ื ืฉืœ ื—ืœื‘ื•ืŸ Smith-Waterman ื‘ื™ื—ื™ื“ื•ืช ืขื™ื‘ื•ื“ ื’ืจืคื™ื•ืช ืขื CUDA. ืชื•ื›ื ื” ื–ื• ื ื•ืกืคื” ืœ-NVIDIA Tesla Bio Workbench (http://www.nvidia.com/object/swplusplus_on_tesla.html

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ื–ื•ื”ื™ ืืคืœื™ืงืฆื™ื” ืฉื ื™ืชืŸ ืœื”ื‘ื™ื ื’ื ืž-https://sourceforge.net/projects/cudasw/. ื”ื•ื ื”ืชืืจื— ื‘-OnWorks ืขืœ ืžื ืช ืœื”ืคืขื™ืœ ืื•ืชื• ื‘ืื™ื ื˜ืจื ื˜ ื‘ืฆื•ืจื” ื”ืงืœื” ื‘ื™ื•ืชืจ ืžืื—ืช ืžืžืขืจื›ื•ืช ื”ื”ืคืขืœื” ื”ื—ื™ื ืžื™ื•ืช ืฉืœื ื•.


ืฉืจืชื™ื ื•ืชื—ื ื•ืช ืขื‘ื•ื“ื” ื‘ื—ื™ื ื

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