This is the command crb-blast that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
crb-blast - Conditional Reciprocal Best BLAST
DESCRIPTION
CRB-Blast v0.6.4 by Chris Boursnell <cmb211@cam.ac.uk>
Conditional Reciprocal Best BLAST
USAGE: crb-blast <options>
OPTIONS:
--query, -q <s>:
query fasta file
--target, -t <s>:
target fasta file
--evalue, -e <f>:
e-value cut off for BLAST. Format 1e-5 (default: 1.0e-05)
--threads, -h <i>:
number of threads to run BLAST with (default: 1)
--output, -o <s>:
output file as tsv
--split, -s:
split the fasta files into chunks and run multiple blast jobs and then combine
them.
--version, -v:
Print version and exit
--help, -l:
Show this message
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