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PROGRAM:

NAME


pkfilterascii - program to filter data in an ASCII file

SYNOPSIS


pkfilterascii -i input [-ic column] [options] [advanced options]

DESCRIPTION


pkfilterascii filters the columns defined by the option -ic. A varietey of filters can be
selected from with the option -f. The kernel size is defined with the option -dz.
Alternatively, you can define your own filter tap values (use the option -tapz for each
tap). In case of spectral filtering, define the full width half max values (-fwhm value)
or spectral response functions in ASCII files (-srf filename).

OPTIONS


-i filename, --input filename
input ASCII file

-o filename, --output filename
Output ASCII file

-ic column, --inputCols column
input columns (e.g., for three dimensional input data in first three columns use:
-ic 0 -ic 1 -ic 2)

-f filter, --filter filter
filter function (to be implemented: dwt, dwti,dwt_cut)

-dz value, --dz value
filter kernel size in z (band or spectral dimension), must be odd (example: 3).
Set dz>0 if 1-D filter must be used in band domain

-t, --transpose
transpose output with samples in rows and wavelengths in cols

-v level, --verbose level
verbose

Advanced options

-tapz value, --tapz value
taps used for spectral filtering

-fwhm value, --fwhm value
list of full width half to apply spectral filtering (-fwhm band1 -fwhm band2 ...)

-srf filename, --srf filename
list of ASCII files containing spectral response functions (two columns: wavelength
response)

-win col, --wavelengthIn col
column number of input ASCII file containing wavelengths

-wout value, --wavelengthOut value
list of wavelengths in output spectrum (-wout band1 -wout band2 ...)

-interp type, --interp type
type of interpolation for spectral filtering (see
http://www.gnu.org/software/gsl/manual/html_node/Interpolation-Types.html)

-wt type, --wavelet type
wavelet type: daubechies,daubechies_centered, haar, haar_centered, bspline,
bspline_centered

-wf family, --wf family
wavelet family (vanishing moment, see also
http://www.gnu.org/software/gsl/manual/html_node/DWT-Initialization.html)

-cut threshold, --cut threshold
threshold to cut dwt coefficients. Use 0 to keep all.

24 January 2016 pkfilterascii(1)

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