This is the command textsearche that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
textsearch - Search the textual description of sequence(s)
SYNOPSIS
textsearch -sequence seqall -pattern string [-casesensitive boolean] [-html boolean]
-only boolean -heading boolean -usa boolean -accession boolean -name boolean
-description boolean -outfile outfile
textsearch -help
DESCRIPTION
textsearch is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Data retrieval:Text data" command group(s).
OPTIONS
Input section
-sequence seqall
Required section
-pattern string
The search pattern is a regular expression. Use a | to indicate OR. For example:
human|mouse will find text with either 'human' OR 'mouse' in the text
Additional section
-casesensitive boolean
Default value: N
Output section
-html boolean
Default value: N
-only boolean
This is a way of shortening the command line if you only want a few things to be
displayed. Instead of specifying: '-nohead -noname -nousa -noacc -nodesc' to get only
the name output, you can specify '-only -name' Default value: N
-heading boolean
Default value: @(!$(only))
-usa boolean
Default value: @(!$(only))
-accession boolean
Default value: @(!$(only))
-name boolean
Default value: @(!$(only))
-description boolean
Default value: @(!$(only))
-outfile outfile
Use textsearche online using onworks.net services
