This is the Linux app named GNomEx whose latest release can be downloaded as gnomex_tomcat_5.35.zip. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named GNomEx with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
SCREENSHOTS
Ad
GNomEx
DESCRIPTION
Our source code is now on GitHub: https://github.com/hci-gnomex/gnomex. Please refer to GitHub for the latest code.
GNomEx is Genomic LIMS and Data Repository. It holds annotated experiments and downstream analysis and serves data tracks to popular genome browsers such as IGB, IGV, and UCSC genome browser. The LIMS handles all aspects of the experiment from order through results delivery. Experiment platforms supported include Illumina HiSeq, MiSeq, iScan, ABI Sanger sequencing, Affy and Agilent Microarrays, Sequenom MassArray and Bioanalyzer.
GNomEx is a web application with a Flash client user interface and a Java backend that runs on Apache Tomcat. MySQL is used for the database, although any modern RDBMS can be used.
Features
- Configurable for many different sequencing and experiment platforms
- Support for multiple core facilities
- Automated billing/customer notifications
- Configurable annotations for experiments, samples, or analyses
- Built in ABI file viewer
Audience
Science/Research
User interface
Web-based
Programming Language
Java, Flex
Database Environment
MySQL
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/gnomex/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
