EnglishFrenchSpanish

OnWorks favicon

complexe - Online in the Cloud

Run complexe in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command complexe that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


complex - Find the linguistic complexity in nucleotide sequences

SYNOPSIS


complex -sequence seqall -lwin integer -step integer -jmin integer -jmax integer
-omnia toggle -sim integer -freq boolean -print boolean -outfile outfile
-ujtablefile outfile -outseq seqoutall

complex -help

DESCRIPTION


complex is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Nucleic:Composition" command group(s).

OPTIONS


Input section
-sequence seqall

-lwin integer
Default value: 100

-step integer
Displacement of the window over the sequence Default value: 5

-jmin integer
Default value: 4

-jmax integer
Default value: 6

Advanced section
-omnia toggle
Calculate over a set of sequences Default value: N

-sim integer
Calculate the linguistic complexity by comparison with a number of simulations having
a uniform distribution of bases

-freq boolean
Execute the simulation of a sequence based on the base frequency of the original
sequence Default value: N

Output section
-print boolean
Generate a file named UjTable containing the values of Uj for each word j in the real
sequence(s) and in any simulated sequences Default value: N

-outfile outfile

-ujtablefile outfile
Default value: complex.ujtable

-outseq seqoutall

Use complexe online using onworks.net services


Free Servers & Workstations

Download Windows & Linux apps

  • 1
    Image Downloader
    Image Downloader
    Crawl and download images using
    Selenium Using python3 and PyQt5.
    Supported Search Engine: Google, Bing,
    Baidu. Keywords input from the keyboard
    or input from ...
    Download Image Downloader
  • 2
    Eclipse Tomcat Plugin
    Eclipse Tomcat Plugin
    The Eclipse Tomcat Plugin provides
    simple integration of a tomcat servlet
    container for the development of java
    web applications. You can join us for
    discussio...
    Download Eclipse Tomcat Plugin
  • 3
    WebTorrent Desktop
    WebTorrent Desktop
    WebTorrent Desktop is for streaming
    torrents on Mac, Windows or Linux. It
    connects to both BitTorrent and
    WebTorrent peers. Now there's no
    need to wait for...
    Download WebTorrent Desktop
  • 4
    GenX
    GenX
    GenX is a scientific program to refine
    x-ray refelcetivity, neutron
    reflectivity and surface x-ray
    diffraction data using the differential
    evolution algorithm....
    Download GenX
  • 5
    pspp4windows
    pspp4windows
    PSPP is a program for statistical
    analysis of sampled data. It is a free
    replacement for the proprietary program
    SPSS. PSPP has both text-based and
    graphical us...
    Download pspp4windows
  • 6
    Git Extensions
    Git Extensions
    Git Extensions is a standalone UI tool
    for managing Git repositories. It also
    integrates with Windows Explorer and
    Microsoft Visual Studio
    (2015/2017/2019). Th...
    Download Git Extensions
  • More »

Linux commands

Ad