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subread-fullscan - Online in the Cloud

Run subread-fullscan in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command subread-fullscan that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


subread-fullscan - scans the entire genome and reports all matches of a specified sequence

USAGE


subread-fullscan [options] -i <index_name> <read_string>

Required arguments:

-i <string>
Base name of the index.

read_string
The read bases.

Optional arguments:

-m <float>
The minimum fraction of matched bases in the read, 0.8 by default

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