backtrackergmt - Online in the Cloud

PROGRAM:

NAME

backtracker - Generate forward and backward flowlines and hotspot tracks

SYNOPSIS

backtracker [ table ] rot_file|lon/lat/angle [ [young/old] ] [ f|b ] [ drift.txt ] [
f|bstep ] [ upper_age ] [ fixed_age ] [ filestem ] [ zero_age ] [ [level] ] [ [a|t] ] [
-b<binary> ] [ -d<nodata> ] [ -h<headers> ] [ -i<flags> ] [ -o<flags> ] [ -:[i|o] ]

Note: No space is allowed between the option flag and the associated arguments.

DESCRIPTION

backtracker reads (longitude, latitude, age) positions from infiles [or standard input]
and computes rotated (x,y,t) coordinates using the specified rotation parameters. It can
either calculate final positions [Default] or create a sampled track (flowline or hotspot
track) between the initial and final positions. The former mode allows additional data
fields after the first 3 columns which must have (longitude,latitude,age). See option -:
on how to read (latitude,longitude,age) files.

REQUIRED ARGUMENTS

-Erotfile
Give file with rotation parameters. This file must contain one record for each
rotation; each record must be of the following format:

lon lat tstart [tstop] angle [ khat a b c d e f g df ]

where tstart and tstop are in Myr and lon lat angle are in degrees. tstart and
tstop are the ages of the old and young ends of a stage. If tstop is not present in
the record then a total reconstruction rotation is expected and tstop is implicitly
set to 0 and should not be specified for any of the records in the file. If a
covariance matrix C for the rotation is available it must be specified in a format
using the nine optional terms listed in brackets. Here, C = (g/khat)*[ a b d; b c
e; d e f ] which shows C made up of three row vectors. If the degrees of freedom
(df) in fitting the rotation is 0 or not given it is set to 10000. Blank lines and
records whose first column contains # will be ignored. You may prepend a leading +
to the filename to indicate you wish to invert the rotations. Alternative 1: Give
the filename composed of two plate IDs separated by a hyphen (e.g., PAC-MBL) and we
will instead extract that rotation from the GPlates rotation database. We return an
error if the rotation cannot be found. Alternative 2: Specify lon/lat/angle, i.e.,
the longitude, latitude, and opening angle (all in degrees and separated by /) for
a single total reconstruction rotation.

OPTIONAL ARGUMENTS

table One or more ASCII (or binary, see -bi[ncols][type]) data table file(s) holding a
number of data columns. If no tables are given then we read from standard input.

-A[young/old]
Used in conjunction with -Lb|f to limit the track output to those sections whose
predicted ages lie between the specified young and old limits. If -LB|F is used
instead then the limits apply to the stage ids (id 1 is the youngest stage). If no
limits are specified then individual limits for each record are expected in columns
4 and 5 of the input file.

-Df|b Set the direction to go: -Df will go backward in time (from younger to older
positions), while -Db will go forward in time (from older to younger positions)
[Default]. Note: For -Db you are specifying the age at the given location, whereas
for -Df you are not; instead you specify the age at the reconstructed point.

-Fdrift.txt
Supply a file with lon, lat, age records that describe the history of hotspot
motion for the current hotspot. The reconstructions will only use the 3rd data
input column (i.e., the age) to obtain the location of the hotspot at that time,
via an interpolation of the hotspot motion history. This adjusted location is then
used to reconstruct the point or path [No drift].

-Lf|bstep
Specify a sampled path between initial and final position: -Lf will draw particle
flowlines, while -Lb will draw backtrack (hotspot track) paths. Append sampling
interval in km. If step < 0 then only the rotation times will be returned. When -LF
or -LB is used, the third output column will contain the stage id (1 is youngest)
[Default is along-track predicted ages]. You can control the direction of the paths
by using -D.

-Nupper_age
Set the maximum age to extend the oldest stage rotation back in time [Default is no
extension].

-Qfixed_age
Assign a fixed age to all positions. Only lon, lat input is expected [Default
expects longitude, latitude, age]. Useful when the input are points defining
isochrons.

-Sfilestem
When -L is set, the tracks are normally written to stdout as a multisegment file.
Specify a filestem to have each track written to filestem.#, where # is the track
number. The track number is also copied to the 4th output column.

-Tzero_age
Set the current time [Default is 0 Ma].

-V[level] (more ...)
Select verbosity level [c].

-W[a|t]
Rotates the given input (lon,lat,t) and calculates the confidence ellipse for the
projected point. The input point must have a time coordinate that exactly matches a
particular total reconstruction rotation time, otherwise the point will be skipped.
Append t or a to output time or angle, respectively, after the projected lon, lat.
After these 2-3 items, we write azimuth, major, minor (in km) for the 95%
confidence ellipse. See -D for the direction of rotation.

-bi[ncols][t] (more ...)
Select native binary input. [Default is 3 input columns].

-bo[ncols][type] (more ...)
Select native binary output. [Default is same as input].

-d[i|o]nodata (more ...)
Replace input columns that equal nodata with NaN and do the reverse on output.

-h[i|o][n][+c][+d][+rremark][+rtitle] (more ...)
Skip or produce header record(s).

-icols[l][sscale][ooffset][,...] (more ...)
Select input columns (0 is first column).

-ocols[,...] (more ...)
Select output columns (0 is first column).

-:[i|o] (more ...)
Swap 1st and 2nd column on input and/or output.

-^ or just -
Print a short message about the syntax of the command, then exits (NOTE: on Windows
use just -).

-+ or just +
Print an extensive usage (help) message, including the explanation of any
module-specific option (but not the GMT common options), then exits.

-? or no arguments
Print a complete usage (help) message, including the explanation of options, then
exits.

--version
Print GMT version and exit.

--show-datadir
Print full path to GMT share directory and exit.

GEODETIC VERSUS GEOCENTRIC COORDIINATES

All spherical rotations are applied to geocentric coordinates. This means that incoming
data points and grids are considered to represent geodetic coordinates and must first be
converted to geocentric coordinates. Rotations are then applied, and the final
reconstructed points are converted back to geodetic coordinates. This default behavior
can be bypassed if the ellipsoid setting PROJ_ELLIPSOID is changed to Sphere.

EXAMPLES

To backtrack the (x,y,t) points in the file seamounts.txt to their origin (presumably the
hotspot), using the DC85.txt Euler poles, run

gmt backtracker seamounts.txt -Db -EDC85.txt > newpos.txt

To project flowlines forward from the (x,y,t) points stored in several 3-column, binary,
double precision files, run

gmt backtracker points.gmt \* -Df -EDC85.txt -Lf25 -bo -bi3 > lines.b

This file can then be plotted with psxy. To compute the predicted Hawaiian hotspot track
from 0 to 80 Ma every 1 Ma, given a history of hotspot motion file (HIdrift.txt) and a set
of total reconstruction rotations for the plate (PAC_APM.txt), try

echo 204 19 80 | gmt backtracker -Df -EPAC_APM.txt -Lb1 > path.txt

NOTES

GMT distributes the EarthByte rotation model Global_EarthByte_230-0Ma_GK07_AREPS.rot. To
use an alternate rotation file, create an environmental parameters named GPLATES_ROTATIONS
that points to an alternate rotation file.

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