This is the command coordinateTranslate that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
coordinateTranslate - part of mauveAligner package
SYNOPSIS
coordinateTranslate <XMFA alignment> <alignment coordinate file>
DESCRIPTION
Alignment coordinate file should be structured into 2 tab-delimited columns: <block ID>
<column> Output will be the nearest aligned position for each genome in the block, with 0
entries for genomes undefined in the block
Use coordinateTranslate online using onworks.net services