dbshowquerye - Online in the Cloud

PROGRAM:

NAME

dbshowquery - Show possible database queries that use a given data identifier

SYNOPSIS

dbshowquery -identifier string -database string -datatype string [-outfile outfile]
[-html boolean]

dbshowquery -help

DESCRIPTION

dbshowquery is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Information" command group(s).

OPTIONS

Input section
-identifier string
This is a data identifier (e.g. a sequence accession number) that is used to specify
the data (of type 'datatype') to retrieve. If you're unsure of the data identifier(s)
that are used for a given query (database/datatype) use dbtellquery. The types of data
identifier are listed under the 'Data identifier' branch of the EDAM ontology
(http://edamontology.sourceforge.net/). For example values, see the catalogue of
public databases in the EMBOSS data file DRCAT.dat. If you have a data identifier but
are unsure of its type, use idtell.

Required section
Additional section
Advanced section
-database string
This is the name of a database from the catalogue of public databases in the EMBOSS
data file DRCAT.dat. If you are unsure of the available databases use drfind. If you
have a database name but are not sure its valid, use isdbname.

-datatype string
This is the name of a retrievable datatype from the catalogue of public databases in
the EMBOSS data file DRCAT.dat. The names are terms from the 'data' branch of the EDAM
ontology, http://edamontology.sourceforge.net/. If you are unsure of the available
retrievable datatypes for a given database, use dbtellquery. If you have a datatype
name but are not sure its valid, use isdbdata.

Output section
-outfile outfile
Default value: stdout

Html section
-html boolean
If you are sending the output to a file, this will format it for displaying as a table
in a WWW document. Default value: N

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