This is the command fastaq-to_orfs_gff that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
fastaq_to_orfs_gff - Writes a GFF file of open reading frames
DESCRIPTION
usage: fastaq_to_orfs_gff [options] <infile> <outfile>
Writes a GFF file of open reading frames from a sequence file
positional arguments:
infile Name of input file
outfile
Name of output GFF file
optional arguments:
-h, --help
show this help message and exit
--min_length INT
Minimum length of ORF, in nucleotides [300]
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