gensample - Online in the Cloud

This is the command gensample that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gensample - Generates a virtual sample suitable for sequence simulation in ODIN

DESCRIPTION


gensample: Generates a virtual sample suitable for sequence simulation in ODIN

Usage and options:
Create a sample from external maps:

gensample -fr <FOVread> -fp <FOVphase> -fs <FOVslice> -s0 <spin-density> [-t1 <T1map>]
[-t2 <T2map>] [-pm <ppmMap>] [-ir <inplane-reduction>] [-ss <single-slice number>] [-ft
<comma-separated-list of frame-rates for dymaic phantoms>]
-o <Sample-file>

Create a point-spread function:

gensample -psf -t1 <point T1> -t2 <point T2> [-dc <DiffusionCoeff>] -o
<Sample-file>

Create rectangle of uniform spin distribution about origin in all 3 spatial
dimensions:

gensample -uni -n <size> -f <FOV> [-t1 <uniform T1>] [-t2 <uniform T2>] -o
<Sample-file>

Create an isochromat distribution:

gensample -iso -n <size> -df <freq-distribution-width[kHz]> -t1 <point T1> -t2
<point T2> [-dc <point Dcoeff>] -o <Sample-file>

Create a homogenous disk with given radius:

gensample -dsk -n <size> -f <FOV> -R <radius> [-t1 <uniform T1>] [-t2 <uniform T2>]
[-dc <uniform DiffusionCoeff>] -o <Sample-file>

Create coaxial cylinder:

gensample -cyl -n <size> -f <FOV> -Xi <inner-suscept[ppm]> -Xo <outer-suscept[ppm]>
-Ri <inner-radius> -Ro <outer-radius> [-t1 <uniform T1> -t2 <uniform T2> -sl
<single-line>] -o <Sample-file>

Other options:
-v <loglevel> or <component:loglevel> for debugging/tracing all components or a single
component, respectively. Possible values for loglevel are: 0(noLog), 1(errorLog),
2(warningLog), 3(infoLog).

-h, --help, -help, --version : Print help text or version information

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