LAsort - Online in the Cloud

PROGRAM:

NAME

LAsort - sort .las alignment files

SYNOPSIS

LAsort [-v] align:las ...

DESCRIPTION

Sort each .las alignment file specified on the command line. For each file it reads in
all the overlaps in the file and sorts them in lexicographical order of (a,b,o,ab)
assuming each alignment is recorded as a[ab,ae] x b^o[bb,be]. It then writes them all to
a file named align.S.las (assuming that the input file was align.las). With the -v option
set, the program reports the number of records read and written.

SEE ALSO
daligner(1) LAmerge(1) LAshow(1) LAcat(1) LAsplit(1) LAcheck(1) HPCdaligner(1)
HPCmapper(1)

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