This is the command loadChemistry that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
loadChemistry.py - Load PacBio sequencing chemistry information
DESCRIPTION
loadChemistry.py
Load chemistry info into a cmp.h5, just copying the triple.
Note
that there is no attempt to "decode" chemistry barcodes here---this is a dumb pipe.
usage:
% loadChemistry [input.fofn | list of input.ba[sx].h5] aligned_reads.cmp.h5
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