This is the command palindromee that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
palindrome - Finds inverted repeats in nucleotide sequence(s)
SYNOPSIS
palindrome -sequence seqall -minpallen integer -maxpallen integer -gaplimit integer
-nummismatches integer -outfile outfile -overlap boolean
palindrome -help
DESCRIPTION
palindrome is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Nucleic:Repeats" command group(s).
OPTIONS
Input section
-sequence seqall
Required section
-minpallen integer
Default value: 10
-maxpallen integer
Default value: 100
-gaplimit integer
Default value: 100
-nummismatches integer
Output section
-outfile outfile
-overlap boolean
Default value: Y
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