This is the command prophete that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
prophet - Scan one or more sequences with a Gribskov or Henikoff profile
SYNOPSIS
prophet -sequence seqall -infile infile -gapopen float -gapextend float -outfile align
prophet -help
DESCRIPTION
prophet is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Nucleic:Profiles,Protein:Profiles" command group(s).
OPTIONS
Input section
-sequence seqall
-infile infile
Required section
-gapopen float
Default value: 1.0
-gapextend float
Default value: 1.0
Output section
-outfile align
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