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rdp-readseq - Online in the Cloud

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This is the command rdp-readseq that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


rdp-readseq: - Ribosomal Database Project (RDP) sequence reading and writing

SYNOPSIS


rdp-readseq <subcommand> <subcommand args ...>

DESCRIPTION


rdp-readseq is a simple user interface to the sequence reading library developed by the
Ribosomal Database Project. It can handle genbank, embl, fasta, fastq, sff and sto files.
It can read from files or streams, and can handle indexing files.

OPTIONS


List of subcommands:

random-sample
- random select a subset or subregion of sequences

reverse-comp
- reverse complement sequences

rm-dupseq
- remove identical or substring of sequences

select-seqs
- select or deselect sequences from a file

split - split sequences

to-fasta
- convert to fasta format

to-fastq
- convert to fastq format

to-stk - convert to stk format

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