This is the command rearrange.pl that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
rearrange.pl -- rearrange an anchors file according to some rules
SYNOPSIS
rearrange.pl <input anchors> <permutation> eg. rearrange.pl myalign.anchors 2 3 1 4
OPTIONS
--output - force output to go to some particular file (otherwise it's automatically
derived from the input filenames)
Use rearrange.pl online using onworks.net services