This is the command reconcile that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
reconcile - This program outputs the reconciliation that minimizes the number of
duplications
SYNOPSIS
reconcile [OPTIONS] gene-tree species-tree [gene-species-map]
DESCRIPTION
This program outputs the reconciliation that minimizes the number of duplications
OPTIONS
--help Display help (this text).
-V, --version
Print version and exit
-r, --reroot any|random|no
Reroot the tree to minimize the number of implied duplications/losses if the most
parsimonious reconciliation is chosen. Default is "no".
-w --weights FLOAT FLOAT
Determine the relative importance of duplications vs losses. First weight is for
duplications and the second for losses. The default is 1.0,0.0 which counts
duplications only. Weights are required to be positive.
EXIT STATUS
0 Successful program execution.
1 Some error occurred
URL
The prime-phylo home page: http://prime.sbc.su.se
Use reconcile online using onworks.net services
