This is the command showtree that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
showtree - View and/or convert phylogenetic trees in the terminal.
SYNOPSIS
showtree [OPTIONS] [treefile]
DESCRIPTION
View and/or convert phylogenetic trees in the terminal.
treefile is the filename of the for the file containing trees in PRIME format.
OPTIONS
--help Display help (this text).
-V, --version
Print version and exit
-e, --show-edgetimes
Show edge times
-n, -show-nodetimes
Show node times
-b, --show-edgeweights
Show edge weights (i.e. branch lengths)
-x, --show-tot-edgetime
Show total edge time instead of tree
-y, --show-tot-edgeweight
Show total edge weight instead of tree
-c, --read-edge-times-after-colon
Read edge times after colon
-p, --convert-and-output-tree-in-prime-format
Convert and output tree in PRIME format
-i, --show-id
Show ID (only valid together with -p)
-S, --read-tree-from-stdin
Read tree from STDIN (no <treefile> nor <tree> needed)
-f, --format asciidrawing|prime|newick|simplenewick
The output format. Default is asciidrawing. Output formats:
newick - convert and output tree in NEWICK format
simplenewick - Simple newick format, no branch lengths. This also enables reading
of unbalanced trees.
prime - prime format
asciidrawing - an ascii drawing
-t, --tree-number
Use the tree with this number. If not set all trees will be printed out.
-t, --tree-number
Use the tree with this number. If not set all trees will be printed out.
EXIT STATUS
0 Successful program execution.
1 Some error occurred
URL
The prime-phylo home page: http://prime.sbc.su.se
Use showtree online using onworks.net services
