tfscane - Online in the Cloud

This is the command tfscane that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


tfscan - Identify transcription factor binding sites in DNA sequences

SYNOPSIS


tfscan -sequence seqall -menu list -custom datafile -mismatch integer [-minlength integer]
-outfile report

tfscan -help

DESCRIPTION


tfscan is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Nucleic:Transcription" command group(s).

OPTIONS


Input section
-sequence seqall

-menu list
Default value: V

-custom datafile

Required section
-mismatch integer

Additional section
-minlength integer
Default value: 1

Output section
-outfile report

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