This is the Linux app named mPUMA whose latest release can be downloaded as sffs-for-mPUMA-manuscript-MVP-titanium-repB.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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mPUMA
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DESCRIPTION
mPUMA: microbial Profiling Using Metagenomic Assembly
This is a software package which was designed to allow researchers to profile microbial communities using a de novo assembly approach to form Operational Taxonomic Units (OTUs). While originally designed to support the analysis of cpn60 based amplicons, mPUMA can be used to analyze data from any suitable DNA barcode.
A manuscript describing mPUMA is currently being developed and will be submitted for peer review presently.
If you are interested in using mPUMA pre-publication please contact the project admin(s) with any questions.
Audience
Science/Research
User interface
Command-line
Programming Language
Perl
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/mpuma/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
