This is the Linux app named LiDSiM to run in Linux online whose latest release can be downloaded as lidsim_r2.zip. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named LiDSiM to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
LiDSiM to run in Linux online
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DESCRIPTION
LiDSiM is a tool to estimate the possible influence of error-tolerant database searches and proteogenomic approaches on the amount of unidentified spectra and the ratios of taxonomic relationship of identified spectra in MS/MS studies of microbial proteomes.For more details about LiDSiM and its functioning, please see
"Estimating the Computational Limits of Detection of Microbial Non-Model Organisms"
Mathias Kuhring and Bernhard Y. Renard
(http://onlinelibrary.wiley.com/doi/10.1002/pmic.201400598/abstract)
PLEASE NOTE, it is recommended to read the paper and the readme.txt file before using LiDSiM.
Audience
Science/Research
User interface
Command-line
Programming Language
Java, S/R
This is an application that can also be fetched from https://sourceforge.net/projects/lidsim/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
