This is the Linux app named Bio::NEXUS whose latest release can be downloaded as Bio-NEXUS-0.78.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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Bio::NEXUS
Ad
DESCRIPTION
If you manage phylogenetic data, Bio::NEXUS can make your life easier with a library and ready-made tools to manipulate and visualize NEXUS files (see http://www.molevol.org/nexplorer and http://search.cpan.org/dist/Bio-NEXUS/doc/Tutorial.pod).Features
- easy to install: perl -MCPAN -e 'install Bio::NEXUS'
- manipulate data in NEXUS files using a command-line tool (nextool.pl)
- write a custom script to select (exclude) OTUs from matrix AND tree
- write a custom script to re-root a tree (or a thousand trees at once)
- generate scalable PS image of data and tree (nexplot.pl)
Audience
Developers, Other Audience, Science/Research
Programming Language
Perl
This is an application that can also be fetched from https://sourceforge.net/projects/bionexus/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.