This is the Linux app named 123Fastq whose latest release can be downloaded as 123Fastq_v1.3.rar. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named 123Fastq with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
SCREENSHOTS:
123Fastq
DESCRIPTION:
123Fastq performs all the pre-processes around next-generation sequencing reads (FASTQ files) easier than ever in the field of open source tools.
Download quick user manual for the latest version:
http://Trainbit.com/files/7168391484/123Fastq_v1.3_Manual.pdf
Author:
Milad Eidi
Supervisors:
Javad Zahiri, PhD
University of California San Diego
Masoud Garshasbi, PhD
Tarbiat Modares University, Tehran, Iran
##########################################################
Take care of the details and ensure you use the latest version.
We hope this helps...
Features
- Next generation sequencing reads quality check
- Quality check of paired-end reads
- Flexible trimmer
- Trim recommendations based on quality check results
- Adapter decontamination by two approaches
- Fast5 to FASTQ conversion
- SAM/BAM to FASTQ conversion
- Cross platform (unix, windows)
- Written in java
User interface
Java Swing
Programming Language
Java
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/project-123ngs/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.