This is the Linux app named ALEXA-Seq whose latest release can be downloaded as ALEXA_Seq_v.1.17.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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ALEXA-Seq
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DESCRIPTION
ALEXA-Seq is a method for using massively parallel paired-end transcriptome sequencing for 'alternative expression analysis'.
Features
- Alternative expression analysis
- WTSS/RNA-Seq library quality assessment
- Gene expression analysis
- Novel transcript discovery
- Visualization of sequence feature expression, differential expression and alternative expression
Audience
Science/Research
User interface
Console/Terminal
Programming Language
Unix Shell, Perl, S/R
Database Environment
Perl DBI/DBD, MySQL, Berkeley/Sleepycat/Gdbm (DBM)
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/alexa-seq/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
