This is the Linux app named AstroBioTools whose latest release can be downloaded as windows-64-bit.zip. It can be run online in the free hosting provider OnWorks for workstations.
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AstroBioTools
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DESCRIPTION
A new, fast implementation of algorithms used for the adaptive analysis of amino acid alphabets as described in
Philip, G. K., & Freeland, S. J. (2011). Did evolution select a nonrandom “alphabet” of amino acids? Astrobiology, 11(3), 235-240.
Ilardo, M., Meringer, M., Freeland, S., Rasulev, B., & Cleaves II, H. J. (2015). Extraordinarily adaptive properties of the genetically encoded amino acids. Scientific reports, 5, 9414.
Ilardo, M., Bose, R., Meringer, M., Rasulev, B., Grefenstette, N., Stephenson, J., Freeland, S., Gillams, R. J. , Butch C. J., & Cleaves, H. J. (2019). Adaptive properties of the genetically encoded amino acid alphabet are inherited from its subsets. Scientific reports, 9(1), 1-9.
Example program calls:
./CliAdaptiveAnalysis -i data/Table1913Aa4Prop.txt -n 100000
./CliAdaptiveAnalysis -i data/Table1913Aa4Prop.txt -n 100000000 -v
Features
- adaptive analysis
- subset sampler
- coverage calculator
User interface
Console/Terminal, Command-line
Programming Language
C++
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/astrobiotools/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
