This is the Linux app named BADASS whose latest release can be downloaded as badass.zip. It can be run online in the free hosting provider OnWorks for workstations.
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BADASS
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DESCRIPTION
BADASS is a software with a user-friendly graphical interface applied to the search and analysis of bacteriocin diversity in whole-metagenome shotgun sequencing data. The search for bacteriocin sequences is performed with tools such as BLAST or DIAMOND using the BAGEL4 database as a reference. The putative bacteriocin sequences identified are used to determine the abundance and richness of the three classes described so far. Abundance is calculated by comparing the reads identified as bacteriocins to the reads identified as 16S rRNA gene using SILVA database as a reference. The user is able to change the main parameters of the analysis in the graphical interface.
Features
- The version badass_v1.2 provides the possibility to run MAC and Windows. In addition to Linux.
This is an application that can also be fetched from https://sourceforge.net/projects/badass/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
