This is the Linux app named BIGSdb to run in Linux online whose latest release can be downloaded as bigsdb_1.27.0.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named BIGSdb to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
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BIGSdb to run in Linux online
DESCRIPTION
The Bacterial Isolate Genome Sequence Database (BIGSdb) is a scalable, web-accessible database system designed to store and analyse linked phenotypic and genotypic information in a computationally efficient manner. Sequence data can range from single sequence reads to multiple contigs generated by whole genome sequencing technologies. The system incorporates the capacity to define and identify any number of loci and genetic variants at those loci within the stored nucleotide sequences. These loci can be further organised into schemes for isolate characterisation or for evolutionary or functional analyses.See Jolley and Maiden 2010, BMC Bioinformatics 11:595 (http://www.biomedcentral.com/1471-2105/11/595).
You can report bugs or make enhancement requests using the issues tracker at https://github.com/kjolley/BIGSdb. The source code is also mirrored there.
Audience
Science/Research, Advanced End Users, Developers
User interface
Web-based
Programming Language
Perl, JavaScript
Database Environment
PostgreSQL (pgsql)
This is an application that can also be fetched from https://sourceforge.net/projects/bigsdb/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
