This is the Linux app named BPGA whose latest release can be downloaded as BPGA-1.3-mswin-x64-0-0-0.zip. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS:
BPGA
DESCRIPTION:
BPGA is a fast pan-genome analysis tool for microbial genomes. Along with regular pan genome profiles, BPGA also provides detailed statistics and sequences with their downstream analysis like KEGG/COG assignments and phylogeny based on core as well as pan genome. In addition, it also studies genes with extreme/atypical GC contents as that of the genomic GC content, sub-grouping of large datasets etc.Features
- Pan-genome Profile
- Gene Family Distribution (Shared and New Genes)
- Phylogeny
- Function and Pathway assignments
Audience
Science/Research
This is an application that can also be fetched from https://sourceforge.net/projects/bpgatool/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.