This is the Linux app named CDSbank whose latest release can be downloaded as CDSbank-0.9.1alpha.tgz. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS
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CDSbank
DESCRIPTION
CDSbank is a database that stores both the protein-coding DNA sequence (CDS) and amino acid sequence for each protein annotated in Genbank. CDSbank also stores Genbank feature annotation, a flag to indicate incomplete 5’ and 3’ ends, full taxonomic data, and a heuristic to rank the scientific interest of a species. This rich information allows fully automated data set preparation with a level of sophistication that meets or exceeds manual processing. Defaults ensure ease of use for typical scenarios while allowing great flexibility when needed. Access is via a free web service at http://hazeslab.med.ualberta.ca/CDSbank/. SourceForge code can be used to build a local installation.
Audience
Science/Research
User interface
Web-based, Command-line
Programming Language
Python
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/cdsbank/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.