This is the Linux app named dna-bison to run in Linux online whose latest release can be downloaded as bison-0.3.3.tgz. It can be run online in the free hosting provider OnWorks for workstations.
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dna-bison to run in Linux online
DESCRIPTION:
Bison allows users with access to a computer cluster to rapidly align whole-genome bisulfite sequencing or RRBS reads. It can align both directional and non-directional libraries and uses bowtie2.Multiple compute nodes are not absolutely required, but will make the alignment process faster.
Further details available on the Wiki page. Help also available on SEQanswers (http://seqanswers.com/forums/showthread.php?t=31314) or by creating a ticket here.
You can now track the development on github (https://github.com/dpryan79/bison).
There is now a tutorial available in the downloads here: http://sourceforge.net/projects/dna-bison/files/bison_tutorial.tar.gz/download .
Audience
Healthcare Industry, Science/Research, Advanced End Users
User interface
Command-line
Programming Language
C
This is an application that can also be fetched from https://sourceforge.net/projects/dna-bison/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.