This is the Linux app named GenoSuite to run in Linux online whose latest release can be downloaded as EuGenoSuite_Windows.zip. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named GenoSuite to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
GenoSuite to run in Linux online
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DESCRIPTION
GenoSuite is a framework developed for proteogenomic analysis. An updated GenoSuite2 is just released where FDRScore (Jones et al. Proteomics 2009) based strategy is used to integrate results from multiple search algorithms. Prokaryotic Proteogenomic Tool(PPT) is developed as a part of GenoSuite framework. PPT is for finding novel translations in prokaryotic genomes and is dependent on Mass Spectrometry based proteomics data and related genome sequence.Some Key features of the tool are....
(1) Configured for 4 open source algorithms to perform database searching for peptide identification. Any combination of the 4 algorithm can be chosen.
(2) Lists out the genome search specific peptides(Novel peptides).
(3) Spectral matches can be visualized for the quality assessment.
(4) Lists out the novel proteins and changes in the existing protein annotations.
(5) A Visual genomic context of the novel peptides can also be generated.
This is an application that can also be fetched from https://sourceforge.net/projects/proteogenomic/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
