This is the Linux app named INTEGRATE to run in Linux online whose latest release can be downloaded as INTEGRATE.0.2.6.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named INTEGRATE to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
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- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
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INTEGRATE to run in Linux online
DESCRIPTION
INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data.To download source code, reference manual and test case, please go to 'Files'.
Also refer to 'Wiki' for details.
Features
- High sensitivity and specificity
- Exact fusion junctions and genomic breakpoints
- Fast split-read mapping algorithm based on Burrows-Wheeler transform
This is an application that can also be fetched from https://sourceforge.net/projects/integrate-fusion/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
