This is the Linux app named MaxBin to run in Linux online whose latest release can be downloaded as MaxBin-2.2.7.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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SCREENSHOTS:
MaxBin to run in Linux online
DESCRIPTION:
MaxBin is a software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users could understand the underlying bins (genomes) of the microbes in their metagenomes by simply providing assembled metagenomic sequences and the reads coverage information or sequencing reads. For users' convenience MaxBin will report genome-related statistics, including estimated completeness, GC content and genome size in the binning summary page. Users could use MEGAN or similar software on MaxBin bins to find out the taxonomy of each bin after the binning process is finished.The most current version is 2.2.7.
MaxBin was published on Microbiome journal (2:26)! Please cite the Microbiome paper if you use MaxBin in your work.
More information can be found at the official MaxBin website:
http://downloads.jbei.org/data/MaxBin.html to
Features
- Metagenomics Binning
Audience
Healthcare Industry
Programming Language
Perl, C++
This is an application that can also be fetched from https://sourceforge.net/projects/maxbin/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.