This is the Linux app named MIRA whose latest release can be downloaded as mira-4.0.2.tar.bz2. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named MIRA with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
MIRA
DESCRIPTION:
MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.
Features
- Allows hybrid assemblies of Sanger, 454, Solexa, IonTorrent and PacBio (CCS & ecCLR) data
- Can use paired-end and / or unpaired data
- Supports ancillary data in TRACEINFO format (from NCBI)
- Marks places of interest with tags so that these can be found quickly in finishing programs
- Has a SNP analysis pipeline for sequencing data of viruses and procaryonts
Audience
Advanced End Users, Science/Research
User interface
Command-line
Programming Language
C++
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/mira-assembler/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.