This is the Linux app named MToolBox to run in Linux online whose latest release can be downloaded as MToolBox.v0.3.3.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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MToolBox to run in Linux online
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DESCRIPTION
MToolBox is a highly automated bioinformatics pipeline to reconstruct and analyze human mitochondrial DNA from high throughput sequencing data. MToolBox includes an updated computational strategy to assemble mitochondrial genomes from Whole Exome and/or Genome Sequencing (PMID: 22669646) and an improved fragment-classify tool (PMID:22139932) for haplogroup assignment, functional and prioritization analysis of mitochondrial variants. MToolBox provides pathogenicity scores, profiles of genome variability and disease-associations for mitochondrial variants. MToolBox provides also a Variant Call Format file (version 4.0) featuring, for the first time, allele-specific heteroplasmy.Please, check out the most recent updates of the source code with the Github repository of MToolBox:
https://github.com/mitoNGS/MToolBox
or visit the Web version of MToolBox @ MSeqDR:
https://mseqdr.org/mtoolbox.php
Programming Language
Unix Shell, Python
This is an application that can also be fetched from https://sourceforge.net/projects/mtoolbox/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
