This is the Linux app named Musket - short read error corrector to run in Linux online whose latest release can be downloaded as musket-1.1.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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Musket - short read error corrector to run in Linux online
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DESCRIPTION
Musket is an efficient multistage k-mer based corrector for Illumina short read data. This corrector employs the k-mer spectrum approach and introduces three correction techniques in a multistage workflow. Our performance evaluation results, in terms of correction quality and de novo genome assembly measures, reveal that Musket is consistently one of the top performing substitution-error-based correctors. In addition, Musket is multi-threaded using a master-slave model and demonstrates superior parallel scalability compared to all other evaluated correctors as well as a highly competitive overall execution time.Audience
Healthcare Industry, Science/Research
User interface
Console/Terminal, Command-line
Programming Language
C++
This is an application that can also be fetched from https://sourceforge.net/projects/musket/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
