This is the Linux app named PhageTerm whose latest release can be downloaded as phageterm-1.0.12.zip. It can be run online in the free hosting provider OnWorks for workstations.
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PhageTerm
DESCRIPTION
NEW VERSION (PhageTermVirome) AVAILABLE AT :
(To access the lightest version)
https://gitlab.pasteur.fr/vlegrand/ptv/-/releases
This new version is now compatible with PYTHON3 and now allows the analysis of multiple phage genomes/contigs (multifasta) in a single analysis.
However, like before, you can still perform the analysis on a single phage genome/contig.
Description : PhageTerm and PhageTermVirome are a theoretical and statistical framework to analyze DNA termini and phage packaging mechanisms using next-generation sequencing data.
A direct graphical interface is still available as a Galaxy wrapper version at https://galaxy.pasteur.fr (Single contig input version only).
This is an application that can also be fetched from https://sourceforge.net/projects/phageterm/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
