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PingPongPro download for Linux

Free download PingPongPro Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named PingPongPro whose latest release can be downloaded as pingpongpro-v1.0-windows64.zip. It can be run online in the free hosting provider OnWorks for workstations.

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PingPongPro


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DESCRIPTION

IMPORTANT NOTE: This project has been migrated to GitHub and is no longer maintained here. Please refer to:
https://github.com/suhrig/pingpongpro

Piwi-interacting RNAs (piRNAs) are a class of small non-coding RNAs, predominantly active in the germ line. There, they limit the detrimental effect of transposons on the genome. They do so by forming a complex with Piwi proteins. The complex binds and then cleaves mRNA molecules of active transposons. The resulting mRNA fragments induce the production of more piRNAs, thus reinforcing the anti-transposon response in a feed-forward loop called the "ping-pong cycle".
A key question in ping-pong cycle research is identification of piRNAs which are amplified through the cycle. PingPongPro is a command-line tool for detecting ping-pong cycle activity in piRNA-Seq data.

PingPongPro was developed at the Institute of Molecular Biology gGmbH in Mainz.



Audience

Science/Research


User interface

Command-line


Programming Language

C++


Categories

Bio-Informatics

This is an application that can also be fetched from https://sourceforge.net/projects/pingpongpro/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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