This is the Linux app named PingPongPro to run in Linux online whose latest release can be downloaded as pingpongpro-v1.0-linux64.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named PingPongPro to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
PingPongPro to run in Linux online
Ad
DESCRIPTION
IMPORTANT NOTE: This project has been migrated to GitHub and is no longer maintained here. Please refer to:https://github.com/suhrig/pingpongpro
Piwi-interacting RNAs (piRNAs) are a class of small non-coding RNAs, predominantly active in the germ line. There, they limit the detrimental effect of transposons on the genome. They do so by forming a complex with Piwi proteins. The complex binds and then cleaves mRNA molecules of active transposons. The resulting mRNA fragments induce the production of more piRNAs, thus reinforcing the anti-transposon response in a feed-forward loop called the "ping-pong cycle".
A key question in ping-pong cycle research is identification of piRNAs which are amplified through the cycle. PingPongPro is a command-line tool for detecting ping-pong cycle activity in piRNA-Seq data.
PingPongPro was developed at the Institute of Molecular Biology gGmbH in Mainz.
Audience
Science/Research
User interface
Command-line
Programming Language
C++
This is an application that can also be fetched from https://sourceforge.net/projects/pingpongpro/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
