This is the Linux app named Protein Cavity Search to run in Linux online whose latest release can be downloaded as cavity-search-0.21.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named Protein Cavity Search to run in Linux online with OnWorks for free.
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- 1. Downloaded this application in your PC.
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Protein Cavity Search to run in Linux online
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DESCRIPTION
Software to identify cavities and crevices in proteins. The goal is to be able to take a protein structure, and to differentiate between five different types of environments for each residue: buried, surface, interfacial, cavity, or crevice.Features
- Calculate volumes of internal cavities
- Determine environment of ionizable residues
- Calculate depth of burial for ionizable residues
- Calculate packing density for ionizable residues
Audience
Science/Research
User interface
Command-line
Programming Language
Python
This is an application that can also be fetched from https://sourceforge.net/projects/cavity-search/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
