This is the Linux app named RNAseq-DEG-MethodLimit whose latest release can be downloaded as Analysis.zip. It can be run online in the free hosting provider OnWorks for workstations.
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RNAseq-DEG-MethodLimit
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DESCRIPTION
This is not really a "final" dataset.
While the analysis has to come as a secondary priority to other responsibilities, this data set can serve at least 2 purposes:
1) Provide an experimental public lab notebook / log for an on-going experiment
2) After a few processed data sets have been added, provide an intermediate citation
In the meantime, the best citation to use is probably the GitHub acknowledgements:
https://github.com/cwarden45/RNAseq_templates/blob/master/TopHat_Workflow/README.md
This is an application that can also be fetched from https://sourceforge.net/projects/rnaseq-deg-methodlimit/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
