This is the Linux app named scFvMiner to run in Linux online whose latest release can be downloaded as scFvMiner.zip. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named scFvMiner to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
scFvMiner to run in Linux online
Ad
DESCRIPTION
These scripts written in java can be used for deep sequencing analysis of the scFv antibodies from a synthetic antibody library and yields complete sequence information on the randomized areas of antibodies enriched from the library by phage display. The methods are descriped in Lövgen, J., Pursiheimo, J.P., Pyykkö, M., Salmi, J. & Lamminmäki, U. (2016) Next generation sequencing of all variable loops of synthetic single framework scFv – application in anti-HDL antibody selections. New Biotechnology 33:790-796.Features
- next generation sequencing
- CDR loops
Programming Language
Java
This is an application that can also be fetched from https://sourceforge.net/projects/scfvminer/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
