This is the Linux app named Seal whose latest release can be downloaded as seal-0.4.0-rc2.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named Seal with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
Seal
Ad
DESCRIPTION
Seal is a Hadoop-based distributed short read alignment and analysis toolkit. Currently Seal includes tools for: read demultiplexing, read alignment, duplicate read removal, sorting read mappings, and calculating statistics for empirical base quality recalibration. Seal scales, easily handling TB of data.Features
- short read alignment (based on BWA)
- duplicate read identification
- sort read mappings
- calculate empirical base quality recalibration tables
- fast, scalable, reliable (runs on Hadoop)
This is an application that can also be fetched from https://sourceforge.net/projects/biodoop-seal/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
