This is the Linux app named SWAPHI-LS: Alignment on Xeon Phi Cluster to run in Linux online whose latest release can be downloaded as swaphi-ls-v1.0.12.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named SWAPHI-LS: Alignment on Xeon Phi Cluster to run in Linux online with OnWorks for free.
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SWAPHI-LS: Alignment on Xeon Phi Cluster to run in Linux online
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DESCRIPTION
The first parallel Smith-Waterman algorithm exploiting Intel Xeon Phi clusters to accelerate the alignment of long DNA sequences. This algorithm is written in C++ (with a set of SIMD intrinsic extensions), OpenMP and MPI. The performance evaluation revealed that our algorithm achieves very stable performance, and yields a performance of up to 30.1 GCUPS on a single Xeon Phi and up to 111.4 GCUPS on four Xeon Phis sharing a host.Audience
Science/Research
User interface
Console/Terminal, Command-line
Programming Language
C++
This is an application that can also be fetched from https://sourceforge.net/projects/swaphi-ls/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
