This is the Linux app named TUIT to run in Linux online whose latest release can be downloaded as tuit.1.0.4.1.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named TUIT to run in Linux online with OnWorks for free.
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TUIT to run in Linux online
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DESCRIPTION
For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve
out of the box compatability with tools, that assume RDP-formatted input.
A new field has been added to the properties.xml, please make sure to update it to contain
<OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section.
Read our paper in Biotechniques: http://www.ncbi.nlm.nih.gov/pubmed/24502797
Taxonomic Unit Identification Tool (TUIT) is a free open source platform-independent software, designed specifically to facilitate taxonomic annotation of nucleotide sequences via BLAST homology search against the NCBI databases. TUIT is immediately applicable for both to 16S microboime studies as well as for taxonomic classification of the nucleotide reads. Please see the project's Wiki page.
Audience
Science/Research
User interface
Command-line
Programming Language
Java
Database Environment
JDBC, SQL-based
This is an application that can also be fetched from https://sourceforge.net/projects/tuit/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
